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View bacteriocin : Enterocin A |
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| [Ref. 2] | NUCLEOTIDE SEQUENCE, STRAIN=CTC492 Harvarstein L. "", Submitted (DEC-1995) to the EMBL/GenBank/DDBJ databases. |
| [Ref. 3] | NUCLEOTIDE SEQUENCE, STRAIN=N15 Uchiyama K., Losteinkit C., Shioya S. "Characterization of bacteriocin produced by Enterococcus faecium N15 and cloning of the related genes.", Submitted (FEB-2000) to the EMBL/GenBank/DDBJ databases. |
| Sequence |
........10 ........20 ........30 ........40 ........50 | | | | | TTHSGKYYGN GVYCTKNKCT VDWAKATTCI AGMSIGGFLG GAIPGKC |
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| Wheel representation |
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| Formula |
C211
H329
N57
O63
S5
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| Absent amino acids |
EQR |
| Common amino acids |
G |
| Mass (Da) |
4851.38 |
| Net charge |
+5 |
| Isoelectric point |
8.98 |
| Basic residues |
6 |
| Acidic residues |
1 |
| Hydrophobic residues |
12 |
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| Polar residues |
26 |
| Aliphatic residues |
6 |
| Tiny residues |
15 |
| Boman Index |
-20.81 |
| Hydropathy Index |
-0.03 |
| Aliphatic Index |
54.04 |
| Instability Index |
25.08 (stable)
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| Half Life |
Mammalian : 7.2 hour
Yeast : >20 hour
E. coli : >10 hour |
| Extinction Coefficient |
10220 M-1 cm-1 |
| Absorbance 280nm |
222.17 |
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Red solid plot : values according to the hydrophobicity scale of Kyte and Doolittle (reference paper).
Yellow dashed plot : Experimentally determined hydrophobicity scale for proteins at membrane interfaces(reference paper).
Green dotted-dashed plot : prediction of transmembrane helices (reference paper). In this scale (unlike the others), more negative values reflect greater hydrophobicity.
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