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View bacteriocin : Enterocin 1071A |
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| Sequence |
........10 ........20 ........30 ........40 ........50 ........60 | | | | | | MKQYKVLNEK EMKKPIGGES VFSKIGNAVG PAAYWILKGL GNMSDVNQAD RINRKKH |
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| Wheel representation |
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| Formula |
C283
H462
N82
O80
S3
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| Absent amino acids |
CT |
| Common amino acids |
K |
| Mass (Da) |
6408.42 |
| Net charge |
+7 |
| Isoelectric point |
10.6 |
| Basic residues |
12 |
| Acidic residues |
5 |
| Hydrophobic residues |
17 |
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| Polar residues |
16 |
| Aliphatic residues |
11 |
| Tiny residues |
13 |
| Boman Index |
-101.24 |
| Hydropathy Index |
-0.68 |
| Aliphatic Index |
75.26 |
| Instability Index |
13.64 (stable)
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| Half Life |
Mammalian : 30 hour
Yeast : >20 hour
E. coli : >10 hour |
| Extinction Coefficient |
8480 M-1 cm-1 |
| Absorbance 280nm |
151.43 |
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Red solid plot : values according to the hydrophobicity scale of Kyte and Doolittle (reference paper).
Yellow dashed plot : Experimentally determined hydrophobicity scale for proteins at membrane interfaces(reference paper).
Green dotted-dashed plot : prediction of transmembrane helices (reference paper). In this scale (unlike the others), more negative values reflect greater hydrophobicity.
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