View bacteriocin : Enterocin 1071A

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[Ref. 1] | View abstract | Export citation
NUCLEOTIDE SEQUENCE, STRAIN=BFE 1071
MEDLINE=20208822;PubMed=10742203;DOI=10.1128/AEM.66.4.1298-1304.2000
Balla E., Dicks L.M., Du Toit M., Van Der Merwe M.J., Holzapfel W.H.
"Characterization and cloning of the genes encoding enterocin 1071A and enterocin 1071B, two antimicrobial peptides produced by Enterococcus faecalis BFE 1071.", Appl. Environ. Microbiol. 66:1298-1304(2000).

[Ref. 2] | View abstract | Export citation
NUCLEOTIDE SEQUENCE, STRAIN=BFE 1071
PubMed=15718027;DOI=10.1016/j.ijfoodmicro.2004.08.008
Balla E., Dicks L.M.
"Molecular analysis of the gene cluster involved in the production and secretion of enterocins 1071A and 1071B and of the genes responsible for the replication and transfer of plasmid pEF1071.", Int. J. Food Microbiol. 99:33-45(2005).

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BibTeX
Sequence
 ........10 ........20 ........30 ........40 ........50 ........60 
          |          |          |          |          |          | 
 MKQYKVLNEK EMKKPIGGES VFSKIGNAVG PAAYWILKGL GNMSDVNQAD RINRKKH

Wheel representation
Composition
Formula C283 H462 N82 O80 S3
Absent amino acids CT
Common amino acids K
Mass (Da) 6408.42
Net charge +7
Isoelectric point 10.6
Basic residues 12
Acidic residues 5
Hydrophobic residues 17
Polar residues 16
Aliphatic residues 11
Tiny residues 13
Boman Index -101.24
Hydropathy Index -0.68
Aliphatic Index 75.26
Instability Index 13.64 (stable)
Half Life Mammalian : 30 hour
Yeast : >20 hour
E. coli : >10 hour
Extinction Coefficient 8480 M-1 cm-1
Absorbance 280nm 151.43
Red solid plot : values according to the hydrophobicity scale of Kyte and Doolittle (reference paper).


Yellow dashed plot : Experimentally determined hydrophobicity scale for proteins at membrane interfaces(reference paper).


Green dotted-dashed plot : prediction of transmembrane helices (reference paper). In this scale (unlike the others), more negative values reflect greater hydrophobicity.

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