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View bacteriocin : Enterocin 96 |
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| [Ref. 1] | View abstract | Export citation | PubMed=19411428;DOI=10.1128/AEM.02772-08 Izquierdo, Esther, Wagner, Camille, Marchioni, Eric, Aoude-Werner, Dalal, Ennahar, Said. "Enterocin 96, a novel class II bacteriocin produced by Enterococcus faecalis WHE 96, isolated from Munster cheese", Appl. Environ. Microbiol. 2009 0: AEM.02772-08. |
| Sequence |
........10 ........20 ........30 ........40 ........50 | | | | | MSKRDCNLMK ACCAGQAVTY AIHSLLNRLG GDSSDPAGCN DIVRKYCK |
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| Wheel representation |
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| Formula |
C214
H355
N67
O68
S7
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| Absent amino acids |
EFW |
| Common amino acids |
AC |
| Mass (Da) |
5493.92 |
| Net charge |
+4 |
| Isoelectric point |
8.5 |
| Basic residues |
8 |
| Acidic residues |
4 |
| Hydrophobic residues |
13 |
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| Polar residues |
19 |
| Aliphatic residues |
8 |
| Tiny residues |
13 |
| Boman Index |
-86.9 |
| Hydropathy Index |
-0.25 |
| Aliphatic Index |
71.25 |
| Instability Index |
53.47 (unstable)
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| Half Life |
Mammalian : 30 hour
Yeast : >20 hour
E. coli : >10 hour |
| Extinction Coefficient |
2980 M-1 cm-1 |
| Absorbance 280nm |
68.72 |
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Red solid plot : values according to the hydrophobicity scale of Kyte and Doolittle (reference paper).
Yellow dashed plot : Experimentally determined hydrophobicity scale for proteins at membrane interfaces(reference paper).
Green dotted-dashed plot : prediction of transmembrane helices (reference paper). In this scale (unlike the others), more negative values reflect greater hydrophobicity.
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