View bacteriocin : thuricin-17 Bookmark and Share

Accession BAC177
Name thuricin-17
Related Entries thuricin-S
Gene tucA1
Class Class IId
Producer Organism Bacillus thuringiensis NEB17 [Gram-positive]
Taxonomy BacteriaFirmicutesBacillalesBacillaceaeBacillusBacillus cereus group
Target organisms Escherichia coli MM294 4(pBS42) - Bacillus thuringiensis ssp. thuringiensis HD2 - Bacillus thuringiensis ssp. sotto 4-1 - Bacillus thuringiensis ssp. galleriae HD29 - Bacillus thuringiensis ssp. canadensis HD224 - Bacillus thuringiensis ssp. entomocidus HD10 - Bacillus thuringiensis ssp. morrisoni HD12 - Bacillus thuringiensis ssp. darmstadiensis HD146 (103) - Bacillus thuringiensis ssp. pakistani HD395 - Bacillus thuringiensis ssp. indiana HD521 - Bacillus thuringiensis ssp. tochigiensis HD868 (117-72) - Bacillus thuringiensis ssp. cameroun 273B - Bacillus thuringiensis serovar xiaguangiensis 3397 - Bacillus thuringiensis serovar asturiensis EA 34594 - Bacillus thuringiensis serovar rongseni Scg04-02 - Bacillus thuringiensis ssp. thuringiensis Bt1627 - Bacillus thuringiensis ssp. alesti HD4 - Bacillus cereus T-HT - Bacillus cereus T-HW3 - Bacillus cereus 6A3 StrepR - Bacillus cereus ATCC 14579 - Bacillus licheniformis 9945A - Bacillus licheniformis 749 - Bacillus megaterium ATCC 19213 - Bacillus megaterium QM B1551 - Bacillus pumilus ATCC 7061 - Bacillus KTCC B1 - Bacillus KTCC B2 - Brevibacillus brevis ATCC 8246 - Geobacillus stearothermophilus 10 - Paenibacillus polymyxa ATCC 842 - Paenibacillus dendritiformis C168 - note: not active against Bacillus thuringiensis NEB17 - Bradyrhizobium japonicum 532C - Bradyrhizobium japonicum USDA 3 - Bradyrhizobium japonicum USDA 110 - Escherichia coli JM83 3(pMK3) - Pseudomonas putida NRLL-B-14688 - Ralstonia spp. H16 ATCC 17699 - Serratia proteomaculans 1-102 - Serratia proteomaculans 2-68R - Stenotrophomoas meiltophilia Alfa-nod - Staphylococcus epidermidis ATCC 12228 - Bacillus thuringiensis ssp. kurstaki HD1 - Bacillus thuringiensis ssp. entomocidus HD9 - Bacillus thuringiensis ssp. subtoxicus HD109 - Bacillus licheniformis Alfa-Rhiz - Bacillus pumilus Biosubtyl - Bacillus sphaericus 1593 - Bacillus subtilis NEB 5 - Bacillus subtilis NEB 4 - Bacillus subtilis ssp. subtilis 168 - Aneurinibacillus migulanus NRS-1137T
Swiss-Prot Entry B5U2V4
PDB Entry Unknown
Other databases EMBL FJ159242EMBL FJ159242EMBL FJ159242
[Ref. 1] | View abstract | Export citation
NUCLEOTIDE SEQUENCE.
PubMed=19083012;DOI=10.1007/s00425-008-0870-6
Lee K.D., Gray E.J., Mabood F., Jung W.J., Charles T., Clark S.R., Ly A., Souleimanov A., Zhou X., Smith D.L.
"The class IId bacteriocin thuricin-17 increases plant growth.";", Planta 229:747-755(2009)

[Ref. 2] | View abstract | Export citation

PubMed=16478494;
Gray EJ, Lee KD, Souleimanov AM, Di Falco MR, Zhou X, Ly A, Charles TC, Driscoll BT, Smith DL.
"A novel bacteriocin, thuricin 17, produced by plant growth promoting rhizobacteria strain Bacillus thuringiensis NEB17: isolation and classification.", J Appl Microbiol. 100(3):545-54(2006)

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Sequence
........10........20........30........40
| | | |
DWTCWSCLVCAACSVELLNLVTAATGASTAS
Wheel representation
Composition
AA N° %

AA N° %

AA N° %
Ala 6 19.35%

Ile 0 .00%

Arg 0 .00%
Cys 4 12.90%

Lys 0 .00%

Ser 4 12.90%
Asp 1 3.23%

Leu 4 12.90%

Thr 4 12.90%
Glu 1 3.23%

Met 0 .00%

Val 3 9.68%
Phe 0 .00%

Asn 1 3.23%

Trp 2 6.45%
Gly 1 3.23%

Pro 0 .00%

Tyr 0 .00%
His 0 .00%

Gln 0 .00%
Total 31
Formula C134 H212 N34 O45 S4
Absent amino acids FHIKMPQRY
Common amino acids A
Mass (Da) 3166.14
Net charge -2
Isoelectric point 3.55
Basic residues 0
Acidic residues 2
Hydrophobic residues 15
Polar residues 14
Aliphatic residues 7
Tiny residues 11
Boman Index 7.33
Hydropathy Index 0.96
Aliphatic Index 97.74
Instability Index 35.15 (stable)
Half Life Mammalian : 1.1 hour
Yeast : 3 min
E. coli : >10 hour
Extinction Coefficient 11000 M-1 cm-1
Absorbance 280nm 375
Red solid plot : values according to the hydrophobicity scale of Kyte and Doolittle (reference paper).


Yellow dashed plot : Experimentally determined hydrophobicity scale for proteins at membrane interfaces(reference paper).


Green dotted-dashed plot : prediction of transmembrane helices (reference paper). In this scale (unlike the others), more negative values reflect greater hydrophobicity.

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